BioFSharp 2.0.0-beta3
See the version list below for details.
dotnet add package BioFSharp --version 2.0.0-beta3
NuGet\Install-Package BioFSharp -Version 2.0.0-beta3
<PackageReference Include="BioFSharp" Version="2.0.0-beta3" />
paket add BioFSharp --version 2.0.0-beta3
#r "nuget: BioFSharp, 2.0.0-beta3"
// Install BioFSharp as a Cake Addin #addin nuget:?package=BioFSharp&version=2.0.0-beta3&prerelease // Install BioFSharp as a Cake Tool #tool nuget:?package=BioFSharp&version=2.0.0-beta3&prerelease
BioFSharp aims to be a user-friendly library for Bioinformatics written in F#.
This is the core package that contains optimized biological datastructures
(For example aminoacdis, nucleotides, and sequences consisting of them) and core
bioinformatic algorithms (such as alignments or pattern search). BioFSharp has many
more to offer in its subnamespaces, so be sure to check them out!
Product | Versions Compatible and additional computed target framework versions. |
---|---|
.NET | net5.0 was computed. net5.0-windows was computed. net6.0 was computed. net6.0-android was computed. net6.0-ios was computed. net6.0-maccatalyst was computed. net6.0-macos was computed. net6.0-tvos was computed. net6.0-windows was computed. net7.0 was computed. net7.0-android was computed. net7.0-ios was computed. net7.0-maccatalyst was computed. net7.0-macos was computed. net7.0-tvos was computed. net7.0-windows was computed. net8.0 was computed. net8.0-android was computed. net8.0-browser was computed. net8.0-ios was computed. net8.0-maccatalyst was computed. net8.0-macos was computed. net8.0-tvos was computed. net8.0-windows was computed. |
.NET Core | netcoreapp2.0 was computed. netcoreapp2.1 was computed. netcoreapp2.2 was computed. netcoreapp3.0 was computed. netcoreapp3.1 was computed. |
.NET Standard | netstandard2.0 is compatible. netstandard2.1 was computed. |
.NET Framework | net45 is compatible. net451 was computed. net452 was computed. net46 was computed. net461 was computed. net462 was computed. net463 was computed. net47 is compatible. net471 was computed. net472 was computed. net48 was computed. net481 was computed. |
MonoAndroid | monoandroid was computed. |
MonoMac | monomac was computed. |
MonoTouch | monotouch was computed. |
Tizen | tizen40 was computed. tizen60 was computed. |
Xamarin.iOS | xamarinios was computed. |
Xamarin.Mac | xamarinmac was computed. |
Xamarin.TVOS | xamarintvos was computed. |
Xamarin.WatchOS | xamarinwatchos was computed. |
-
- FSharp.Core (>= 4.7.0)
- FSharpAux (>= 1.0.0)
- FSharpAux.IO (>= 1.0.0)
NuGet packages (11)
Showing the top 5 NuGet packages that depend on BioFSharp:
Package | Downloads |
---|---|
BioFSharp.IO
Read/write functions for various biological file formats |
|
BioFSharp.ML
Machine learning with BioFSharp and CNTK.Net. |
|
BioFSharp.BioContainers
Open source bioinformatics and computational biology toolbox written in F#. |
|
BioFSharp.Parallel
GPU parallelized functions from BioFSharp |
|
BIO-BTE-06-L-7_Aux
Auxiliary functions for the course BIO-BTE-06-L-7 |
GitHub repositories
This package is not used by any popular GitHub repositories.
Version | Downloads | Last updated |
---|---|---|
2.0.0-preview.3 | 1,196 | 5/11/2022 |
2.0.0-preview.2 | 140 | 2/13/2022 |
2.0.0-preview.1 | 160 | 1/26/2022 |
2.0.0-beta7 | 880 | 9/29/2021 |
2.0.0-beta6 | 837 | 5/10/2021 |
2.0.0-beta5 | 1,322 | 2/16/2021 |
2.0.0-beta4 | 3,863 | 6/24/2020 |
2.0.0-beta3 | 1,141 | 6/22/2020 |
2.0.0-beta2 | 1,134 | 6/22/2020 |
2.0.0-beta1 | 1,192 | 5/6/2020 |
2.0.0-beta | 1,246 | 4/28/2020 |
1.2.1-beta2 | 1,203 | 4/28/2020 |
1.2.1-beta1 | 1,138 | 4/28/2020 |
1.2.0 | 3,101 | 3/30/2020 |
1.1.0 | 1,700 | 3/23/2020 |
1.0.3 | 1,747 | 2/26/2020 |
1.0.2 | 1,776 | 2/19/2020 |
(preview packages available on nuget)
Additions:**
BioFSharp**:
[Conversion extensions for BioCollections]()
BioFSharp.BioContainers**
BLAST biocontainer :
full blastn, blastn-short, megablast, and dc-megablast DSLs
full blastp, blastp-fast, and blastp-short DSLs
TargetP BioContainer :
Add functions to run the container with a mounted directory
BioFSharp.IO**:
OBO parser: Extended term parser for spec 1.4
Bugfixes:**
BioFSharp.IO**:
OBO parser now correctly parses lists of relationships
FastA.writeToStream is now correctly typed and doe snot close the stream after writing